Project-Team:BAMBOO

Project-Team Bamboo

Members

Overall Objectives

Research Program

Application Domains

Domain

New Software and Platforms

New Results

Evolution of the genomes of endosymbionts in insects: the case of Hamiltonella defensa interacting with its various partners
Cardinium cBtQ1 providing insights into genome reduction, symbiont motility, and its settlement in Bemisia tabaci
Mitochondrial respiration and genomic analysis provide insight into the influence of the symbiotic bacterium on host trypanosomatid oxygen consumption
Telling metabolic stories to explore metabolomics data
MiRNA and co: Methodologically exploring the world of small RNAs
Efficient Algorithms for analysing RNA-seq Data
Reference-free detection of isolated SNPs
Endothelial, epithelial, and fibroblast cells exhibit specific splicing programs independently of their tissue of origin
Length and symmetry on the sorting by weighted inversions problem
Efficient tree reconciliation enumerator plus cophylogeny reconstruction algorithm via an Approximate Bayesian Computation
Others

Partnerships and Cooperations

Dissemination

Bibliography

Publications of the year

Inria | Raweb 2014 | Presentation of the Project-Team BAMBOO | BAMBOO Web Site


	PDF	e-Pub

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Section: Partnerships and Cooperations

National Initiatives

ABS4NGS

Title: Solutions Algorithmiques, Bioinformatiques et Logicielles pour le Séquençage Haut Débit
Coordinator: E. Barillot
BAMBOO participant(s): V. Lacroix
Type: ANR (2012-2015)
Web page: Not available

Colib'read

Title: Methods for efficient detection and visualization of biological information from non assembled NGS data
Coordinator: P. Peterlongo
BAMBOO participant(s): V. Lacroix, A. Julien-Lafferière, C. Marchet, G. Sacomoto, M.-F. Sagot, B. Sinaimeri
Type: ANR (2013-2016)
Web page: http://colibread.inria.fr/

Exomic

Title: Functional annotation of the transcriptome at the exon level
Coordinator: D. Auboeuf (Inserm, Lyon)
BAMBOO participant(s): V. Lacroix, M.-F. Sagot
Type: INSERM Systems Biology Call (2012-2015)
Web page: Not available

Effets de l'environnement sur la stabilité des éléments transposables

Title: Effets de l'environnement sur la stabilité des éléments transposables
Coordinator: C. Vieira
BAMBOO participant(s): C. Vieira
Type: Fondation pour la Recherche Médicale (FRM) (2014-2016)
Web page: Not available

ExHyb

Title: Exploring genomic stability in hybrids
Coordinator: C. Vieira
BAMBOO participant(s): C. Vieira
Type: ANR (2014-2018)
Web page: Not available

IMetSym

Title: Immune and Metabolic Control in Intracellular Symbiosis of Insects
Coordinator: A Heddi
BAMBOO participant(s): H. Charles, S. Colella
Type: ANR Blanc (2014-2017)
Web page: Not available

ImmunSymbArt

Title: Immunity and Symbiosis in Arthropods
Coordinator: D. Bouchon
BAMBOO participant(s): F. Vavre
Type: ANR Blanc (2010-2014)
Web page: Not available

Metagenomics of Bemisia tabaci

Title: Metagenomics of Bemisia tabaci symbiotic communities
Coordinator: L. Mouton (LBBE, UCBL)
BAMBOO participant(s): F. Vavre, M.-F. Sagot
Type: Genoscope Project
Web page: Not available

SpeciAphid

Title: Evolutionary genetics and mechanisms of plant adaptation in aphids
Coordinator: Jean-Christophe Simon (IGEPP, INRA, Rennes)
BAMBOO participant(s): H. Charles, S. Colella, Y. Rahbé
Type: ANR (2012-2014)
Web page: Not available

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